Initial import of LogDarioSeq baseline

Establishes version control for the personal Logseq DB fork before
starting the server-client architecture migration and domain features
described in docs/agent-guide and the approved implementation plan.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>

cli/spec/formatting/db_worker_types.mli

@@ -0,0 +1,19 @@
+type list_options = Melange_edn_melange.any
+
+type page_filter = {
+  expand : bool;
+  include_hidden : bool;
+  include_built_in : bool;
+  include_journal : bool;
+  journal_only : bool;
+  created_after : Time.date option;
+  updated_after : Time.date option;
+}
+
+type node_filter = {
+  tag_ids : Cli_primitive.db_id Rrbvec.t;
+  property_idents : Cli_primitive.keyword Rrbvec.t;
+}
+
+val minimal_list_item :
+  Entity.t -> Melange_edn_melange.map Melange_edn_melange.t

cli/spec/formatting/humanize_types.mli

@@ -0,0 +1,5 @@
+val format_count : int -> string
+val pluralize_noun : int -> string -> string
+val format_count_with_noun : int -> string -> string
+val datetime : now:int64 -> ?suffix:string -> ?prefix:string -> int64 -> string
+val relative_datetime : then_time:Time.date -> now_time:Time.date -> string

cli/spec/formatting/log_types.mli

@@ -0,0 +1,13 @@
+type preview = { preview : string; length : int; truncated : bool }
+type level = Debug | Info | Warn | Error
+
+type record = {
+  time : Time.date option;
+  level : level;
+  logger : string option;
+  message : string;
+  exception_ : string option;
+}
+
+val truncate_preview : ?max_len:int -> Melange_edn_melange.any -> preview
+val install_stderr_handler : unit -> unit

cli/spec/formatting/pretty_print.mli

@@ -0,0 +1,2 @@
+val pprint_edn : Melange_edn_melange.any -> string
+val pprint_json : Js.Json.t -> string

cli/spec/formatting/profile_types.mli

@@ -0,0 +1,33 @@
+type span = {
+  stage : string;
+  span_id : int;
+  start_time : Time.date;
+  end_time : Time.date;
+  elapsed_span : Time.span;
+}
+
+type stage_summary = {
+  stage : string;
+  count : int;
+  total_span : Time.span;
+  avg_span : Time.span;
+}
+
+type session
+
+type report = {
+  command : string;
+  status : Cli_primitive.keyword;
+  total_span : Time.span;
+  spans : span Rrbvec.t;
+  stages : stage_summary Rrbvec.t;
+}
+
+val create_session : bool -> session option
+
+val time :
+  session option -> string -> (unit -> 'a Cli_effect.t) -> 'a Cli_effect.t
+
+val record_span : session -> span -> unit
+val report : session -> command:string -> status:Cli_primitive.keyword -> report
+val render_lines : report -> string Rrbvec.t

cli/spec/formatting/root_dir_types.mli

@@ -0,0 +1,5 @@
+val default_root_dir : unit -> Cli_primitive.path
+val normalize_root_dir : Cli_primitive.path option -> Cli_primitive.path
+
+val ensure_root_dir :
+  Cli_primitive.path option -> Cli_primitive.path Error.build_result

cli/spec/formatting/tree_text_types.mli

@@ -0,0 +1,6 @@
+type render_options = {
+  uuid_labels : (Cli_primitive.uuid * string) Rrbvec.t;
+  property_titles : (Cli_primitive.keyword * string) Rrbvec.t;
+  property_value_labels : (Melange_edn_melange.any * string) Rrbvec.t;
+  show_ids : bool;
+}

cli/spec/formatting/uuid_refs_types.mli

@@ -0,0 +1,38 @@
+type uuid_label = {
+  uuid : Cli_primitive.uuid;
+  id : Cli_primitive.db_id option;
+  label : string option;
+}
+
+val unique_preserve_order : 'a Rrbvec.t -> 'a Rrbvec.t
+val extract_wiki_refs : string -> string Rrbvec.t
+val extract_uuid_refs : string -> Cli_primitive.uuid Rrbvec.t
+
+val replace_uuid_refs :
+  string -> (Cli_primitive.uuid * string) Rrbvec.t -> string
+
+val collect_uuid_refs_from_strings :
+  string Rrbvec.t -> Cli_primitive.uuid Rrbvec.t
+
+val collect_uuid_refs_from_items :
+  Entity.t Rrbvec.t ->
+  Cli_primitive.keyword Rrbvec.t ->
+  Cli_primitive.uuid Rrbvec.t
+
+val normalize_item_string_fields :
+  Entity.t Rrbvec.t ->
+  Cli_primitive.keyword Rrbvec.t ->
+  (Cli_primitive.uuid * string) Rrbvec.t ->
+  Entity.t Rrbvec.t
+
+val fetch_uuid_entities :
+  Cli_config.t ->
+  Cli_primitive.repo ->
+  Cli_primitive.uuid Rrbvec.t ->
+  uuid_label Rrbvec.t Cli_effect.t
+
+val fetch_uuid_labels :
+  Cli_config.t ->
+  Cli_primitive.repo ->
+  Cli_primitive.uuid Rrbvec.t ->
+  (Cli_primitive.uuid * string) Rrbvec.t Cli_effect.t